Learn ChIP-Seq & ScATAC-Seq Data Analysis Using Linux and R

Partner: Udemy
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Description: Are you ready to dive into the world of gene regulation and chromatin accessibility using cutting-edge bioinformatics tools? This course, “Master ChIP-Seq and ATAC-Seq Analysis Using Linux and R,” is your gateway to understanding and performing real-world epigenomics data analysis from scratch.Designed for students, researchers, and professionals in bioinformatics, biotechnology, and genomics, this hands-on course will take you on a comprehensive journey through ChIP-Seq (Chromatin Immunoprecipitation Sequencing) and ATAC-Seq (Assay for Transposase-Accessible Chromatin using sequencing) data analysis using powerful open-source tools.You’ll start by understanding the theoretical concepts behind ChIP-Seq and ATAC-Seq technologies, including how they’re used to investigate protein-DNA interactions and chromatin accessibility in cells. These insights are essential in fields like cancer research, developmental biology, immunology, and beyond.What You'll LearnThe complete bioinformatics pipeline for ChIP-Seq and ATAC-SeqSetting up a Linux environment (even on Windows) for analysisRunning quality checks and trimming raw sequencing readsAligning reads to a reference genome and handling alignment filesPerforming peak calling with MACS2Annotating peaks and discovering DNA motifs using HOMERUnderstanding how single-cell ATAC-Seq worksAnalyzing scATAC-Seq datasets in R using the Signac and Seurat packagesVisualizing chromatin accessibility and comparing multiple samplesHands-On Linux and R TrainingNo prior experience with Linux or R? No problem. This course includes a full section on Linux for bioinformatics, where you’ll learn to navigate the file system, run basic commands, and handle
Category: IT & Software > Other IT & Software > Bioinformatics
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Price: 99.99
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Source: Impact
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